An Efficient Algorithm for Generating Super Condensed Neighborhoods
نویسندگان
چکیده
Indexing methods for the approximate string matching problem spend a considerable effort generating condensed neighborhoods. Here, we point out that condensed neighborhoods are not a minimal representation of a pattern neighborhood. We show that we can restrict our attention to super condensed neighborhoods which are minimal. We then present an algorithm for generating Super Condensed Neighborhoods. The algorithm runs in O(mdm/wes), where m is the pattern size, s is the size of the super condensed neighborhood and w the size of the processor word. Previous algorithms took O(mdm/wec) time, where c is the size of the condensed neighborhood. We further improve this algorithm by using Bit-Parallelism and Increased Bit-Parallelism techniques. Our experimental results show that the resulting algorithm is very fast.
منابع مشابه
Efficient generation of super condensed neighborhoods
Indexing methods for the approximate string matching problem spend a considerable effort generating condensed neighborhoods. Condensed neighborhoods, however, are not a minimal representation of a pattern neighborhood. Super condensed neighborhoods, proposed in this work, are smaller, provably minimal and can be used to locate approximate matches that can later be extended by on-line search. We...
متن کاملAn L1-norm method for generating all of efficient solutions of multi-objective integer linear programming problem
This paper extends the proposed method by Jahanshahloo et al. (2004) (a method for generating all the efficient solutions of a 0–1 multi-objective linear programming problem, Asia-Pacific Journal of Operational Research). This paper considers the recession direction for a multi-objective integer linear programming (MOILP) problem and presents necessary and sufficient conditions to have unbounde...
متن کاملFaster Generation of Super Condensed Neighbourhoods Using Finite Automata
We present a new algorithm for generating super condensed neighbourhoods. Super condensed neighbourhoods have recently been presented as the minimal set of words that represent a pattern neighbourhood. These sets play an important role in the generation phase of hybrid algorithms for indexed approximate string matching. An existing algorithm for this purpose is based on a dynamic programming ap...
متن کاملACO-Based Neighborhoods for Fixed-charge Capacitated Multi-commodity Network Design Problem
The fixed-charge Capacitated Multi-commodity Network Design (CMND) is a well-known problem of both practical and theoretical significance. Network design models represent a wide variety of planning and operation management issues in transportation telecommunication, logistics, production and distribution. In this paper, Ant Colony Optimization (ACO) based neighborhoods are proposed for CMND pro...
متن کاملAn Iterated Greedy Algorithm for Solving the Blocking Flow Shop Scheduling Problem with Total Flow Time Criteria
In this paper, we propose an iterated greedy algorithm for solving the blocking flow shop scheduling problem with total flow time minimization objective. The steps of this algorithm are designed very efficient. For generating an initial solution, we develop an efficient constructive heuristic by modifying the best known NEH algorithm. Effectiveness of the proposed iterated greedy algorithm is t...
متن کامل